TOOL BOX
Databank
Metabolic Pathways Reference
Mass-Spectrometry Data Processing
Metabolomics Raw Data Processing And Analysis
Visualization
Other-Metabolic Models
Biomarker Discovery
High Throughput Data Analysis
ReSpect
A collection of literature and in-house MSn spectra data for research on plant metabolomics.
mcID
A web-based resource for identification of compounds of interest based on chemical properties of a molecule, such as accurate mass and fragment ion spectral pattern generated by mass spectrometry (MS)
MetaboBASE
It contains high-resolution, accurate mass MS/MS spectra of over 13,000 metabolic compounds for the seamless identification of metabolites.
BioPathAt
Interface to visualize genome-scale data on biochemical pathway maps
mzCloud
A freely searchable collection of spectra, spectral trees, structures, fragments, precursor ions, chromatographic data and compound related references
Metabolomics Workbench
An international repository for metabolomics data and metadata, metabolite standards, protocols, tutorials and training, and analysis tools
MetaboLights
A database for Metabolomics experiments and derived information.
EcoCyc
The EcoCyc project performs literature-based curation of its genome, and of transcriptional regulation, transporters, and metabolic pathways.
Progenesis QI
Can be used to quantify and identify metabolites, lipids and proteins in samples
MetaCyc
MetaCyc contains pathways involved in both primary and secondary metabolism, as well as associated metabolites, reactions, enzymes, and genes.
HumanCyc
HumanCyc provides an encyclopedic reference on human metabolic pathways, the human genome, and human metabolites.
Reactome
Human metabolic pathways, reactions, proteins, links to other databases